BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B05LP1|AL429515
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1732 1774 0.0
>3x_Contig1732
Length = 24266
Score = 1774 bits (895), Expect = 0.0
Identities = 905/907 (99%), Gaps = 1/907 (0%)
Strand = Plus / Plus
Query: 1 gatccatcgagtcccagaattagtatgtcatgctgttctcgtagattccaatgcttgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5205 gatccatcgagtcccagaattagtatgtcatgctgttctcgtagattccaatgcttgtat 5264
Query: 61 acactccgtgccaaatggaacatgattctatcaacactttcgcacagcttccagggctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5265 acactccgtgccaaatggaacatgattctatcaacactttcgcacagcttccagggctga 5324
Query: 121 ttctctctggctcagatcaatttttgacccgtccaaaacaggtttattcattattaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5325 ttctctctggctcagatcaatttttgacccgtccaaaacaggtttattcattattaaagc 5384
Query: 181 cggaatcgtttatttaattgaatctttaatgttaaccacacggaatggaaaacaaaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5385 cggaatcgtttatttaattgaatctttaatgttaaccacacggaatggaaaacaaaaagg 5444
Query: 241 gagaaagaagaatggacggtagaatttgtttagaagctaggtgattcatacatttaccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5445 gagaaagaagaatggacggtagaatttgtttagaagctaggtgattcatacatttaccgt 5504
Query: 301 gtagctgagtgttcccatttatgtagtttatatggagaaagtatatatggctccgtttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5505 gtagctgagtgttcccatttatgtagtttatatggagaaagtatatatggctccgtttca 5564
Query: 361 aactctgatcttgctctctttctgcatgacgaagagacagaggaaagcaaaggattagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5565 aactctgatcttgctctctttctgcatgacgaagagacagaggaaagcaaaggattagag 5624
Query: 421 acgaacgattcgctgaggacggtgttataccatttattaagcactgaactttcgatccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5625 acgaacgattcgctgaggacggtgttataccatttattaagcactgaactttcgatccga 5684
Query: 481 agtttgtaatccaaggtagaaagagtccaacgttccatgttagccaagtcccgtggtttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5685 agtttgtaatccaaggtagaaagagtccaacgttccatgttagccaagtcccgtggtttc 5744
Query: 541 aatccggatatcaagcaccaagtcttcatcgaaaacgtcgaatcgttgctgaacttgtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5745 aatccggatatcaagcaccaagtcttcatcgaaaacgtcgaatcgttgctgaacttgtgt 5804
Query: 601 gccagaataagacaagacaagaagactcttttcgagcatcttgcaaactctggcatatct 660
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5805 gcaagaataagacaagacaagaaga-tcttttcgagcatcttgcaaactctggcatatct 5863
Query: 661 gtgatggacacgggtttcagtgccttggtataaatctgatggaacagatatgtagcttga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5864 gtgatggacacgggtttcagtgccttggtataaatctgatggaacagatatgtagcttga 5923
Query: 721 atgactacaagttgagatgatttggatctcttgacgacctcattgatgaaatgtaagatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5924 atgactacaagttgagatgatttggatctcttgacgacctcattgatgaaatgtaagatc 5983
Query: 781 aattgtttcgaattgttaattctttggtttgaaaagttggaagtcaatgctgataataaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5984 aattgtttcgaattgttaattctttggtttgaaaagttggaagtcaatgctgataataaa 6043
Query: 841 gtagccacagatccgttcaatttagcattgtgagacgacttttcatgcggcttgatgtca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6044 gtagccacagatccgttcaatttagcattgtgagacgacttttcatgcggcttgatgtca 6103
Query: 901 tcaataa 907
|||||||
Sbjct: 6104 tcaataa 6110
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6951
Number of Sequences: 1807
Number of extensions: 6951
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)